Tools Developed by Our Group

LNB-MDT: An Integrated Python Toolkit for Preparing and Analyzing Lipid Nanobubble Simulations

Others

Draw Molecules

1. Marvin JS Editor (RCSB)

2. JSME (manual)

Images to Structures

1. CollectorTM

2. 摩熵化学（MolAid)

Parameterize Molecules for MD Simulations

1. CGenFF (CHARMM AA FF)

2. Automartini_M3 (Martini3 CG FF)